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  • names:

    DNA FISH probe,allylamine-dUTP

  • CAS號:

    MDL Number:
  • MF(分子式): C12H20N3O14P3.Na MW(分子量): 523.224
  • EINECS: Reaxys Number:14228525
  • Pubchem ID: Brand:BIOFOUNT
DNA FISH probe
DNA FISH probe 可用于通過聚合酶鏈式反應(PCR),在第一鏈cDNA的合成過程中進行間接穩(wěn)定標記。DNA FISH probe 可用作反應性位點,用于后續(xù)的反應性熒光探針的標記。DNA FISH probe 也可用于構建反應性DNA支架。
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中文別名 DNA FISH探針
英文別名 DNA FISH probe;allylamine-dUTP
CAS號
Inchi
InchiKey AAQWIRIAZPJBAM-IVZWLZJFSA-N
分子式 Formula C12H20N3O14P3.Na
分子量 Molecular Weight 523.224
溶解度Solubility
性狀 Solid power
儲藏條件 Storage conditions -20℃條件下存儲

DNA FISH probe can replace TTP in reactions where it serves as a substrate for E. coli DNA polymerase 1 (holoenzyme and Klenow fragment), terminal deoxynucloetide transferase, T4 and Taq DNA polymerases, and reverse transcriptases (from AMV and M-MuLV). 波長:Ex (nm) 454,Em(nm) 511
DNA FISH probe is incorporated into DNA by a variety of labeling reactions including nick translation, random primed DNA synthesis and 3’ end labeling reactions. Allylamine-labeled DNA can be efficiently conjugated to the active ester form of signal generating moieties such as fluorescent dyes, biotin and other haptens to produce labeled probes for hybridization/detection assays. The efficient incorporation of Allylamine-dUTP, in contrast to many dye-labeled nucleotides, provides for greater incorporation of signaling moieties and stronger signals.
DNA FISH probe(allylamine-dUTP )優(yōu)點:
Using indirect labeling with allyamine-dUTPs provide great advantages for FISH probe synthesis that may not be present in direct labeling. One key benefit is that virtually any reporter molecule containing a reactive amine group such as NHS can be linked to the probe. While this of course means molecules such as biotin and other haptens can potentially bind, in the case of FISH it means that virtually any fluorescent molecule can be attached. This provides a high degree of flexibility that can be tailored to one’s own preferences, the same of which cannot be said for direct labeling. While it is true that direct labeling requires fewer steps and can sometimes be cheaper, there are significant hindrances in nucleotide incorporation. Depending on bulkiness, pre-conjugated fluorescent nucleotides can induce steric effects as well as block active and binding sites in transcriptional machinery. Allylamine-dUTPs, on the other hand, do not have these same drawbacks. In various studies, allylamine-dUTP transcription has been shown to have almost identical transcriptional efficiency compared to unmodified NTPs. When conjugating allylamine-dUTP probes with amine-reactive fluorescent molecules in excess, one can expect high levels of fluorophore incorporation and consistency regardless of the chosen fluorescent dye.

產品說明 DNA FISH probe is usually synthesized through heck coupling, which involves uridine containing a 5 carbon halogen reacting with an allylamine. As with other indirect labeling mechanisms,
Introduction
Application1
Application2
Application3
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備注
1. Mikalk?nas, Algirdas; Ravoityt?, Bazil?; Taurait?, Daiva; Servien?, Elena; Me?kys, Rolandas; Serva, Saulius[Journal of Enzyme Inhibition and Medicinal Chemistry, 2018, vol. 33, # 1, p. 384 - 389]
2. Probe production for in situ hybridization by PCR and subsequent covalent labeling with fluorescent dyes. Dirsch O, Ji Y, Bohr J, et al. Appl. Immunohistochem., 15, 332-337 (2007)
3. The fungal pathogen Aspergillus fumigatus regulates growth, metabolism, and stress resistance in response to light. Kevin K Fuller et al. mBio, 4(2) (2013-03-28)
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